.. _auxiliary_progs: ======================================= auxiliary programs ======================================= These auxiliary programs are installed as part of `phydms`_. All of them can be run from the command line. They aid in running multiple analyses with :ref:`phydms_prog`, or in analyzing and visualizing the results. .. toctree:: :maxdepth: 1 phydms_comprehensive_prog phydms_prepalignment phydms_logoplot .. include:: weblinks.txt