Sequencing-based neutralization assays of first infection samples versus H1N1 influenza library from 2022-2023

Study by Loes, Yupeng, et al of samples from a first exposure cohort (either vaccination or infection) using sequencing-based neutralization assay developed in the Bloom lab.

The numerical data and computer code are at https://github.com/jbloomlab/flu_seqneut_Pulendran

Titers for all sera

Interactive chart of titers

Per-serum neutralization titers

PulendranCohort

• 10_VAX_post
• 10_VAX_pre
• 11_VAX_post
• 11_VAX_pre
• 12_VAX_post
• 12_VAX_pre
• 13_VAX_post
• 13_VAX_pre
• 14_VAX_post
• 14_VAX_pre
• 15_VAX_post
• 15_VAX_pre
• 16_VAX_post
• 16_VAX_pre
• 17_VAX_post
• 17_VAX_pre
• 18_VAX_post
• 18_VAX_post2
• 18_VAX_pre
• 19_VAX_post
• 19_VAX_post2
• 19_VAX_pre
• 1_INF_post
• 1_INF_post2
• 1_INF_pre
• 2_INF_post
• 2_INF_pre
• 3_INF_post
• 3_INF_pre
• 4_INF_post
• 4_INF_pre
• 5_INF_post
• 5_INF_pre
• 6_INF_post
• 7_INF_post
• 7_INF_pre
• 8_INF_post
• 8_INF_pre
• 9_INF_post
• 9_INF_pre

Per-plate counts and curve fits

PulendranCohort

• plate1_Pulendran
• plate2_Pulendran
• plate3_Pulendran
• plate4_Pulendran
• plate5_Pulendran
• plate6_Pulendran

Summary of data dropped during quality control

Notebook summarizing QC drops