Interactive plots of estimated fitness effects of SARS-CoV-2 amino-acid mutations

Fitness effects estimated from observed versus expected counts of mutations.

Analysis described in Bloom and Neher (2023).

Interactive plots for public_2023-05-11 dataset:

See Bloom and Neher (2023) for a paper describing the work.

See https://github.com/jbloomlab/SARS2-mut-fitness for full computer code and data.

See https://jbloomlab.github.io/SARS2-mut-fitness/ for links to all interactive plots.

Here are plots for other datasets: