Examples

Here are some examples that illustrate use of pdb_prot_align:

• Alignment of beta-coronavirus Spike proteins to a SARS-CoV structure
• Influenza HAs (H3, H4, H14 subtypes)
• Colored structures in PyMol
• Interactive structures with nglview

The examples can be run as interactive Jupyter notebooks on mybinder by going to the following link (it may take a minute to load) and then opening the notebook you want to run.