Interactive plots of estimated fitness effects of SARS-CoV-2 amino-acid mutations

Fitness effects estimated from observed versus expected counts of mutations.

Analysis described in Bloom and Neher (2023).

Interactive plots for public_2023-10-01 dataset:

See Bloom and Neher (2023) for a paper describing the work.

See for full computer code and data.

See for links to all interactive plots.

Here are plots for other datasets: