Documentation for dms_tools2

dms_tools2 is a software package for analyzing deep mutational scanning data. It is tailored to analyze libraries created using comprehensive codon mutagenesis of protein-coding genes, and perform analyses that are common to the Bloom lab, such as:

The dms_tools2 source code is freely available under a GPLv3 license. dms_tools2 is a re-write of the earlier dms_tools package.

If you use dms_tools2 for your work, please cite the references in Citations.

Installation of dms_tools2 installs a collection of Executable programs as well as a Python API.

The easiest way to learn to use dms_tools2 is to look at the Examples.

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